PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089783.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 361aa    MW: 39955.1 Da    PI: 9.8899
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089783.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix65.41.2e-2071162187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 
                     +W+ +e+ aLi+ +r+++ +lrrg+lk+++W+ev++++          ++++qC++k+e+l+kry+ + +++++   s+  s++++f++++a
  XP_010089783.1  71 CWSPDETAALIDSYRDKWYSLRRGNLKATHWQEVAEAVaarcPTASPAKTAVQCRHKMEKLRKRYRTELQRARSMpVSRFNSSWVHFKRMDA 162
                     7**********************************9996555555668999***********************97799999********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.7E-2270163No hitNo description
PROSITE profilePS500906.0472132IPR017877Myb-like domain
SMARTSM005951.9E-1379168IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MASPAPSPPD SSPPPPGPPQ AIPLALPAPP LPSQPQTPPP PPSSSSQPQP QSQSQPPPPS  60
SSSSRRLPPP CWSPDETAAL IDSYRDKWYS LRRGNLKATH WQEVAEAVAA RCPTASPAKT  120
AVQCRHKMEK LRKRYRTELQ RARSMPVSRF NSSWVHFKRM DAMEKGPSSV KPENSDSPVD  180
DDDHDNDNYG DDDEDPDQRL YEELRFGSNS KNMGNLYRNG GGGGFRIRIP TGVSIAQPGT  240
KFIPKFDQKG NSGSNSGVNF GTKVVKECSS GRASGLGKRE RERDPVGEMV SAIKALGEGF  300
VRMEQMKMEM AREIETIRME MEMKRTEMIL DSQQRIVEAF AKAMSDKKKK KLNKRMPSPE  360
A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089783.10.0hypothetical protein L484_008033
TrEMBLW9R5980.0W9R598_9R
STRINGGLYMA08G05630.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46382838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-66Trihelix family protein